manuscript in thesis example

• Langson Library
• Science Library
• Grunigen Medical Library
• Law Library
• Connect From Off-Campus
• Accessibility
• Gateway Study Center

Email this link

Thesis / dissertation formatting manual (2024).

• Filing Fees and Student Status
• Submission Process Overview
• Electronic Thesis Submission
• Paper Thesis Submission
• Formatting Overview
• Fonts/Typeface
• Pagination, Margins, Spacing
• Paper Thesis Formatting
• Preliminary Pages Overview
• Copyright Page
• Dedication Page
• Table of Contents
• List of Figures (etc.)
• Acknowledgements
• Text and References Overview
• Figures and Illustrations
• Using Your Own Previously Published Materials
• Using Copyrighted Materials by Another Author
• Open Access and Embargoes
• Copyright and Creative Commons
• Ordering Print (Bound) Copies
• Tutorials and Assistance
• FAQ This link opens in a new window

UCI Libraries maintains the following  templates to assist in formatting your graduate manuscript. If you are formatting your manuscript in Microsoft Word, feel free to download and use the template. If you would like to see what your manuscript should look like, PDFs have been provided. If you are formatting your manuscript using LaTex, UCI maintains a template on OverLeaf.

• Annotated Template (Dissertation) 2024 PDF of a template with annotations of what to look out for
• Word: Thesis Template 2024 Editable template of the Master's thesis formatting.
• PDF Thesis Template 2024
• Word: Dissertation Template 2024 Editable template of the PhD Dissertation formatting.
• PDF: Dissertation Template 2024
• Overleaf (LaTex) Template
• << Previous: Tutorials and Assistance
• Next: FAQ >>
• Last Updated: Feb 20, 2024 2:09 PM
• URL: https://guides.lib.uci.edu/gradmanual

Off-campus? Please use the Software VPN and choose the group UCIFull to access licensed content. For more information, please Click here

Software VPN is not available for guests, so they may not have access to some content when connecting from off-campus.

Manuscript-Style Theses and Dissertations

Before you begin, what is a manuscript-style thesis.

A manuscript-style thesis is a document that includes one or more scholarly manuscripts written in a manner suitable for publication in appropriate venues. A manuscript-style thesis allows a student to prepare and present his or her graduate research work in a format that facilitates publication.

A manuscript-style thesis is not, however, merely a collection of published or publishable papers. It must meet the principles and objectives required of a thesis .

Who can submit a manuscript-style thesis?

Number and focus of manuscripts.

Although the Advisory Committee will discuss and approve the number and focus of manuscripts at the proposal stage, this may be modified by agreement of the committee as the research progresses. Such revisions must be approved by the supervisor and Advisory Committee.

Principles of Manuscript-Style Thesis Writing

Consistent with CGPS Policies and Procedures , all theses and dissertations must be written in good scholarly style and conform to the requirements approved by the academic unit. The following are intended to act as guidelines for minimum requirements in the creation of a manuscript-style thesis. Academic units may choose to provide additional discipline-specific instructions.

Choosing the format

The format and style of a thesis may differ from department to department, and from discipline to discipline. The student’s academic unit will identify an acceptable format for the thesis and communicate it to the student, and the style selected must be maintained throughout the thesis.

Consistency

Consistency of format and style is essential in a manuscript-style thesis to produce a coherent and defendable document which will satisfy the principles of a thesis. Consistency will help maintain the integrity of the document as a cohesive whole and sustain the clarity required to facilitate the review of the thesis by the Advisory Committee and Examining Committee. 

Grammar, spelling and punctuation

Accepted rules of grammar must be followed, and forms of spelling and punctuation must be used with consistency.

Previously published manuscripts

Even if a manuscript was published in a particular format, when included as a chapter in a thesis, it will match the formatting standard of the thesis. For example, it is expected that the numbering of tables and figures within chapters should be done for the thesis as a whole, which means that there should not be two tables or two figures in the thesis with the same number. Previously published manuscripts should not simply be inserted into the thesis as copies of journal pages.

To ensure consistency and clarity in presentation, previously published materials should be assigned page numbers that are sequential within the thesis, and page numbers as they may have been assigned within the publication must be removed. The page numbers assigned within the publication will be included in the citation.

Chapter layout

Chapters of the thesis need to be numbered sequentially. Subsections, tables, figures and equations within each chapter will be assigned a unique number, (for example, use the chapter number followed by a sequentially increasing number, separated by a period, i.e. 1.1, 1.2, 1.3…), with no two elements of the same type having the same number. This will help ensure the clarity of the document and ease of navigation for the Examining Committee.

These can either be listed chapter-by-chapter, or be presented in a single list at the end of the thesis. If the chapter-by-chapter approach is adopted, each chapter, including chapters that are not manuscripts (such as the introduction and concluding chapters), requires a list of references.

If a single list appears at the end of the thesis, all references cited in the component manuscripts must be included in the list of references at the end of the thesis.

Getting Started

The thesis is a single cohesive document that presents and describes the entirety of the research work that was conducted as part of the graduate degree. Individual manuscripts in a manuscript-style thesis should fit together into a single body of work to achieve the goals of the thesis.

The manuscript-style thesis, as with any thesis, will develop a general theme that presents the candidate’s research work; it must include an introduction that outlines the theme and objectives of the research, and a conclusion that draws out its overall implications. The different chapters or sections will contribute to the general theme, but the substance of each chapter should focus on a different aspect of the research.

 As the thesis needs to be a single body of work, there needs to be some content of the thesis that deals with the thesis as a whole and unifies it into a single document. How this content is arranged may vary from discipline to discipline, and from thesis to thesis.

Introduction and Literature Review

The purpose of the introduction and review of literature is to

establish the student’s familiarity with relevant work in the field;

establish the purpose and objectives of the research;

place the research within the larger context of the discipline;

and provide overall context for the research manuscript(s).

The introduction should establish the central aim and themes of the research and explain how these are addressed in the various manuscripts making up the thesis. In some disciplines, a separate literature review (possibly as a distinct manuscript) will be a stand-alone chapter, rather than be included in the Introduction; while in other disciplines, the literature review may be incorporated as part of the manuscripts.

Methods (optional)

If appropriate to the discipline, a discussion of methodology, either as its own chapter, a section in the Introduction or, depending on the context, a section in each individual manuscript can be a necessary part of the thesis.

The manuscripts should fit together in the thesis much as chapters would normally fit together in any thesis. Specifically, it needs to be clear to the reader how each manuscript included in the thesis contributes to the overall objectives of the thesis outlined in the abstract and introduction, and should tie each manuscript to the overall aims of the research project.

There needs to be a clear and logical progression from one chapter to the next, so that the thesis functions as a complete and unified whole with a clear singular research project as its focus. How the author of the thesis accomplishes this task is at the discretion of the author, the Advisory Committee and, if available, the policies of the academic unit.

It may be useful to have short transition sections appended either to the beginning or end of appropriate manuscripts that explain the progression from one manuscript to the next; however, this transition may also be accomplished in the introductory and concluding chapters.

Manuscript(s)

Each manuscript should have its own chapter. While the manuscript may be a published document, the format of the document in its role as a component of the thesis must be consistent with the thesis as a whole, regardless of the format in which the document was published (see comments on formatting above).

The manuscript content may also differ from the published version, and may include additional tables, figures or text, as required to ensure clarity. The format of the manuscript would normally include a brief introduction and statement of the research problem; synthesis of the literature; description of research methods and study area (if applicable); analysis, and presentation and discussion of results.

Manuscript length may vary and is at the discretion of the Advisory Committee, although the intent is to emulate the norms of publication or presentation in the discipline.

Discussion and Conclusions

The final chapter revisits the main contributions or findings of the research manuscript(s) within the broader context of the literature and discipline, linking the findings of each manuscript back to the literature  identified  in the introduction. Directions for future research are normally identified in this section, as well as any limitations to the research overall.

Each thesis is required to contain a concluding section that relates the individual manuscripts, and the conclusions drawn in those manuscripts, to the overarching goal of the thesis.

Appendices and Supporting Documentation

Material that is not part of the research manuscript(s) but deemed necessary by the student’s Advisory Committee as supporting documentation (e.g. research instruments; raw data summaries; copyright permissions, additional site descriptions, etc.) should be included in Appendices.

If there are changes suggested to published manuscripts (i.e., chapters of the thesis) through the defence process, these changes may be addressed and included in a separate appendix at the end of the thesis, if copyright issues are a concern, or if it disrupts the flow of a published manuscript to make the changes within the published chapter itself. This consideration is for published manuscripts only.

Co-authored Manuscripts

These can be included in the thesis, if acceptable to the student’s Advisory Committee and approved by the academic unit. The Advisory Committee will confirm that the student has made a substantial contribution to each of the manuscripts, and determine that the paper merits inclusion in the thesis.

There is no limit to the number of co-authors.

Expectations

In a manuscript-style thesis, it is expected that the author of the thesis will be the lead author on at least one manuscript included in the thesis.

The manuscript-style thesis may include both published and unpublished manuscripts. However, the publication status of each manuscript should be clearly indicated.

For each published article, a complete citation, including first and last page numbers and recognition of the copyright holder, should be printed at the beginning of the manuscript.

To assist the Examining Committee in assessing work involving multiple authors, the student should include an explicit statement in the thesis describing his/ her original contributions to the paper in detail, and justifying the inclusion of the paper in the thesis. Individual disciplines and academic units may require further acknowledgment of contributions.

Where there may be two students who will include the same manuscript in two separate theses, each student should acknowledge the existence of the other thesis, and the fact that the manuscript appears in both theses.

Co-authors should understand obligations prior to thesis preparation

There may be cases when the student, supervisor(s) and other research collaborators are co-owners of the intellectual property presented within the thesis, and they may also be co-authors of the manuscript(s). Prior to preparing the thesis, all associated individuals should understand their respective obligations related to data confidentiality (if applicable), copyright, and authorship. The nature of these obligations will vary with discipline and with the specific policies of the academic unit.

With the approval of the academic unit, the same manuscript may appear in more than one thesis if multiple students are co-authors on the manuscript, and each made a significant contribution to the research and preparation of the manuscript.

Unpublished papers

For a paper that has been submitted but not yet published, a statement concerning the status of any dealing or contemplated dealing with the copyright or the auspices under which the work was prepared should be printed at the beginning of the manuscript.

Changes to original manuscript

Review of the thesis.

The merits of the manuscript-style thesis will be judged on the criteria outlined at the beginning of this guide and by the defence processes outlined for all theses. The judgement of the thesis rests with the Examining Committee (Advisory Committee plus the External Examiner) and is independent of, and separate from, any judgement (favourable or unfavourable) related to the acceptance of individual papers for publication or presentation within the relevant discipline.

Similar to all other theses, everything in the thesis is subject to review, criticism and possible revision following the oral defence.

Notwithstanding the status of a manuscript considered for publication by other means, the form and content of the thesis must be deemed acceptable by the External Examiner and a majority of  the Examining Committee in order for the student to complete the degree requirements.

It is the responsibility of the student and any co-authors of material included in the thesis to obtain from all copyright holders written permission to include copyrighted material in the thesis. Written permission must be obtained from any co-author who retains copyright, or from the person to whom the co-author has assigned copyright.

Any payment which might be required by the rights holder(s) is the responsibility of the student. The thesis should indicate that copyrighted and/or co-authored material have been printed either “with permission” or “under license” (either by a statement in the preface or on the first page of each article).

Copies of the letters of permission or licenses must be available upon request and may be included within the thesis as appendices. Given this, it would be good practice for students to inform the journals to which they submit manuscripts that these manuscripts may eventually be included within a manuscript-style thesis.

What could make this page better?

Thank you for helping us make the university website better. Your comment will be forwarded to the editor of this page. Please note that this form is not intended to provide customer service. If you need assistance, please contact us directly.

Main navigation

• Graduate Students
• Faculty & Staff
• General requirements

Manuscript-Based (Article-Based) Theses

• Initial Thesis Submission
• Thesis examination
• Doctoral oral defence
• Final Thesis Submission
• Thesis Writing and Support Resources
• Letters of Completion/PGWP

FAQ on manuscript-based theses

As an alternative to the traditional format, a thesis may be presented as a collection of scholarly papers of which the student is the first author or co-first author. A manuscript-based doctoral thesis must include the text of a minimum of two manuscripts published, submitted or to be submitted for publication. A manuscript-based Master’s thesis must include the text of one or more manuscripts. Articles must be formatted according to the requirements described below. Note that a manuscript-based thesis must follow the general structure of a thesis as explained here . An FAQ explaining the difference between a standard and a manuscript-based thesis is available here .

Manuscripts for publication in journals are frequently very concise documents. A thesis, however, is expected to consist of more detailed, scholarly work. A manuscript-based thesis will be evaluated by the examiners as a unified, logically coherent document in the same way a traditional thesis is evaluated. Publication of manuscripts, or acceptance for publication by a peer-reviewed journal, does not guarantee that the thesis will be found acceptable for the degree sought.

A manuscript-based thesis must:

• be presented with uniform font size, line spacing, and margin sizes (see Thesis Format under Preparation of a Thesis );
• conform to all other requirements listed under Thesis Components on the Preparation of a Thesis page;
• contain additional text that connects the manuscript(s) in a logical progression from one chapter to the next, producing a cohesive, unitary focus, and documenting a single program of research - the manuscript(s) alone do not constitute the thesis;
• stand as an integrated whole.

Any manuscripts that are under review, accepted or published in a journal must be included in your manuscript-based thesis without changes (i.e. identical to the published or submitted versions). The only change is with respect to the font/size which should be the same as the one used for the rest of the thesis for consistency and homogeneity reasons. So each chapter represents a full manuscript and has its own reference list. Then at the end of the thesis, you have a master reference list which includes all the other references cited throughout the other sections of the thesis, mostly within the general introduction but also from the general discussion.

Depending on the feedback of your examiners and/or the oral defence committee, you may be required to make revisions to your thesis before final submission. The committee’s comments must be addressed in the connecting text between chapters and/or the discussion section. You must not make any changes to the manuscripts themselves in your final thesis.

In the case of multiple-authored articles, the student must be the first author . Multiple-authored articles cannot be used in more than one thesis. In the case of students who have worked collaboratively on projects, it may be preferable for both students to write a traditional format thesis, identifying individual contributions. Consult this page for information on intellectual property and required permissions/waivers.

In the case of co-first authored articles , only one student can use the article in a manuscript-based thesis and must have a written agreement from the other co-first author student(s).

This work is licensed under a Creative Commons Attribution Non-Commercial 4.0 International License . Graduate and Postdoctoral Studies, McGill University .

Department and University Information

Graduate and postdoctoral studies.

An official website of the United States government

The .gov means it’s official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

• Publications
• Account settings

Preview improvements coming to the PMC website in October 2024. Learn More or Try it out now .

• Advanced Search
• Journal List
• Biochem Res Int
• v.2022; 2022

Essential Guide to Manuscript Writing for Academic Dummies: An Editor's Perspective

Syed sameer aga.

1 Department of Basic Medical Sciences, Quality Assurance Unit, College of Medicine, King Saud bin Abdulaziz University for Health Sciences (KSAU-HS), King Abdullah International Medical Research Center (KAIMRC), Ministry of National Guard Health Affairs (MNGHA), King Abdulaziz Medical City, Jeddah 21423, Saudi Arabia

2 Molecular Diseases & Diagnostics Division, Infinity Biochemistry Pvt. Ltd, Sajad Abad, Chattabal, Srinagar, Kashmir 190010, India

Saniya Nissar

Associated data.

No data were used in this review.

Writing an effective manuscript is one of the pivotal steps in the successful closure of the research project, and getting it published in a peer-reviewed and indexed journal adds to the academic profile of a researcher. Writing and publishing a scientific paper is a tough task that researchers and academicians must endure in staying relevant in the field. Success in translating the benchworks into the scientific content, which is effectively communicated within the scientific field, is used in evaluating the researcher in the current academic world. Writing is a highly time-consuming and skill-oriented process that requires familiarity with the numerous publishing steps, formatting rules, and ethical guidelines currently in vogue in the publishing industry. In this review, we have attempted to include the essential information that novice authors in their early careers need to possess, to be able to write a decent first scientific manuscript ready for submission in the journal of choice. This review is unique in providing essential guidance in a simple point-wise manner in conjunction with easy-to-understand illustrations to familiarize novice researchers with the anatomy of a basic scientific manuscript.

1. Background

Communication is the pivotal key to the growth of scientific literature. Successfully written scientific communication in the form of any type of paper is needed by researchers and academicians alike for various reasons such as receiving degrees, getting a promotion, becoming experts in the field, and having editorships [ 1 , 2 ].

Here, in this review, we present the organization and anatomy of a scientific manuscript enlisting the essential features that authors should keep in their mind while writing a manuscript.

2. Types of Manuscripts

Numerous types of manuscripts do exist, which can be written by the authors for a possible publication ( Figure 1 ). Primarily, the choice is dependent upon the sort of communication authors want to make. The simplest among the scientific manuscripts is the “Letter to an Editor,” while “Systematic Review” is complex in its content and context [ 3 ].

Types of manuscripts based on complexity of content and context.

3. Anatomy of the Manuscript

Writing and publishing an effective and well-communicative scientific manuscript is arguably one of the most daunting yet important tasks of any successful research project. It is only through publishing the data that an author gets the recognition of the work, gets established as an expert, and becomes citable in the scientific field [ 4 ]. Among the numerous types of scientific manuscripts which an author can write ( Figure 1 ), original research remains central to most publications [ 4 – 10 ].

A good scientific paper essentially covers the important criteria, which define its worth such as structure, logical flow of information, content, context, and conclusion [ 5 ]. Among various guidelines that are available for the authors to follow, IMRAD scheme is the most important in determining the correct flow of content and structure of an original research paper [ 4 , 11 – 13 ]. IMRAD stands for introduction, methods, results, and discussion ( Figure 2 ). Besides these, other parts of the manuscript are equally essential such as title, abstract, keywords, and conclusion ( Figure 3 ).

Generalized anatomy of manuscript based on IMRAD format.

Three important contents of the title page—title, abstract, and keywords.

IMRAD scheme was introduced in the early 1900 by publishers to standardize the single format of the scientific manuscript and since then is the universal format used by most the publishing houses [ 6 , 14 – 17 ]. In the next sections, the contents and criteria of each of them are explained in detail. A list of the most common mistakes, which the author makes in these sections, is also provided in the tabulated form [ 18 ] ( Table 1 ).

Common mistakes authors make in their manuscripts.

• The title is the most important element of the paper, the first thing readers encounter while searching for a suitable paper [ 1 ]. It reflects the manuscript's main contribution and hence should be simple, appealing, and easy to remember [ 7 ].
• A good title should not be more than 15 words or 100 characters. Sometimes journals ask for a short running title, which should essentially be no more than 50% of the full title. Running titles need to be simple, catchy, and easy to remember [ 19 , 20 ].
• Keeping the titles extremely long can be cumbersome and is suggestive of the authors' lack of grasp of the true nature of the research done.
• It usually should be based on the keywords, which feature within the main rationale and/or objectives of the paper. The authors should construct an effective title from keywords existing in all sections of the main text of the manuscript [ 19 ].
• Having effective keywords within the title helps in the easy discovery of the paper in the search engines, databases, and indexing services, which ultimately is also reflected by the higher citations they attract [ 1 ].
• It is always better for the title to reflect the study's design or outcome [ 21 ]; thus, it is better for the authors to think of a number of different titles proactively and to choose the one, which reflects the manuscript in all domains, after careful deliberation. The paper's title should be among the last things to be decided before the submission of the paper for publication [ 20 ].
• Use of abbreviations, jargons, and redundancies such as “a study in,” “case report of,” “Investigations of,” and passive voice should be avoided in the title.

5. Abstract

• The abstract should essentially be written to answer the three main questions—“What is new in this study?” “What does it add to the current literature?” and “What are the future perspectives?”
• A well-written abstract is a pivotal part of every manuscript. For most readers, an abstract is the only part of the paper that is widely read, so it should be aimed to convey the entire message of the paper effectively [ 1 ].

Two major types of abstract—structured and unstructured. Structured abstracts are piecemealed into five different things, each consisting of one or two sentences, while unstructured abstracts consist of single paragraph written about the same things.

• An effective abstract is a rationalized summary of the whole study and essentially should contain well-balanced information about six things: background, aim, methods, results, discussion, and conclusion [ 6 , 19 ].

Three C concept followed while writing the manuscript.

• An abstract should be written at the end, after finishing the writing of an entire manuscript to be able to stand-alone from the main text. It should reflect your study completely without any reference to the main paper [ 19 ].
• The authors need to limit/write their statements in each section to two or three sentences. However, it is better to focus on results and conclusions, as they are the main parts that interest the readers and should include key results and conclusions made thereof.
• Inclusion of excessive background information, citations, abbreviations, use of acronyms, lack of rationale/aim of the study, lack of meaningful data, and overstated conclusions make an abstract ineffective.

6. Keywords

• Keywords are the important words, which feature repeatedly in the study or else cover the main theme/idea/subject of the manuscript. They are used by indexing databases such as PubMed, Scopus, and Embase in categorizing and cross-indexing the published article.
• It is always wise to enlist those words which help the paper to be easily searchable in the databases.
• Keywords can be of two types: (a) general ones that are provided by the journal or indexing services called as medical subject headings (MeSH) as available in NCBI ( https://www.ncbi.nlm.gov/mesh/ ) and (b) custom ones made by authors themselves based on the subject matter of the study [ 6 , 20 ].
• Upon submission, journals do usually ask for the provision of five to ten keywords either to categorize the paper into the subject areas or to assign it to the subspecialty for its quick processing.

7. Introduction

• (i) The whole idea of writing this section is to cover two important questions—“What are the gaps present in the current literature?” and “Why is the current study important?”
• (ii) Introduction provides an opportunity for the authors to highlight their area of study and provide rationale and justification as to why they are doing it [ 20 , 22 , 23 ].
• (iii) An effective introduction usually constitutes about 10–15% of the paper's word count [ 22 ].
• The first paragraph of the introduction should always cover “What is known about the area of study?” or “What present/current literature is telling about the problem?” All relevant and current literature/studies, i.e., original studies, meta-analyses, and systematic reviews, should be covered in this paragraph.
• The second paragraph should cover “What is unknown or not done about this issue/study area?” The authors need to indicate the aspects of what has not been answered about the broader area of the study until now.
• The third paragraph should identify the gaps in the current literature and answer “What gaps in the literature would be filled by their current study?” This part essentially identifies the shortcoming of the existing studies.
• The fourth paragraph should be dedicated to effectively writing “What authors are going to do to fill the gaps?” and “Why do they want to do it?” This paragraph contains two sections—one explains the rationale of the study and introduces the hypothesis of the study in form of questions “What did authors do? and Why they did do so?” and the second enlists specific objectives that the authors are going to explore in this study to answer “Why this study is going to be important?” or “What is the purpose of this study?”.

Funnel-down scheme followed while writing the introduction section of manuscript, moving from broader to specific information.

• (v) Introduction is regarded as the start of the storyline of manuscript, and hence, the three Cs' scheme ( Figure 5 ) becomes more relevant while writing it: the context in terms of what has been published on the current idea/problem around the world, content as to what you are going to do about the problem in hand (rationale), and conclusion as to how it is going to be done (specific objective of the study) [ 1 , 23 ].
• (vi) Introduction is the first section of the main manuscript, which talks about the story; therefore, while writing it authors should always try to think that “would this introduction be able to convince my readers?” [ 25 ]. To emphasize on the importance of the study in filling the knowledge gap is pivotal in driving the message through [ 23 ].
• (vii) Introduction should never be written like a review, any details, contexts, and comparisons should be dealt within the discussion part [ 16 ].
• (viii) While choosing the papers, it is wise to include the essential and recent studies only. Studies more than 10 years old should be avoided, as editors are inclined towards the recent and relevant ones only [ 20 , 22 ].
• (ix) In the last paragraph, enlisting the objectives has a good impact on readers. A clear distinction between the primary and secondary objectives of the study should be made while closing the introduction [ 22 ].
• (i) It is regarded as the skeleton of the manuscript as it contains information about the research done. An effective methods section should provide information about two essential aspects of the research—(a) precise description of how experiments were done and (b) rationale for choosing the specific experiments.
• Study Settings: describing the area or setting where the study was conducted. This description should cover the details relevant to the study topic.

Different guidelines available for perusal of the authors for writing an effective manuscript.

• Sample Size and Sampling Technique: mentioning what number of samples is needed and how they would be collected.
• Ethical Approvals: clearly identifying the study approval body or board and proper collection of informed consent from participants.
• Recruitment Methods: using at least three criteria for the inclusion or exclusion of the study subjects to reach an agreed sample size.
• Experimental and Intervention Details: exhaustively describing each and every detail of all the experiments and intervention carried out in the study for the readers to reproduce independently.
• Statistical Analysis: mentioning all statistical analysis carried out with the data which include all descriptive and inferential statistics and providing the analysis in meaningful statistical values such as mean, median, percent, standard deviation (SD), probability value (p), odds ratio (OR), and confidence interval (CI).

Methods and the seven areas which it should exhaustively describe.

• (iii) Methods should be elaborative enough that the readers are able to replicate the study on their own. If, however, the protocols are frequently used ones and are already available in the literature, the authors can cite them without providing any exhaustive details [ 26 ].
• (iv) Methods should be able to answer the three questions for which audience reads the paper—(1) What was done? (2) Where it was done? and (3) How it was done? [ 11 ].
• (v) Remember, methods section is all about “HOW” the data were collected contrary to “WHAT” data were collected, which should be written in the results section. Therefore, care should be taken in providing the description of the tools and techniques used for this purpose.
• (vi) Writing of the methods section should essentially follow the guidelines as per the study design right from the ideation of the project. There are numerous guidelines available, which author's must make use of, to streamline the writing of the methods section in particular (see Table xx for details).
• (vii) Provision of the information of the equipment, chemicals, reagents, and physical conditions is also vital for the readers for replication of the study. If any software is used for data analysis, it is imperative to mention it. All manufacturer's names, their city, and country should also be provided [ 6 , 11 ].
• The purpose of the results section of the manuscript is to present the finding of the study in clear, concise, and objective manner to the readers [ 7 , 27 , 28 ].
• Results section makes the heart of the manuscript, as all sections revolve around it. The reported findings should be in concordance with the objectives of the study and be able to answer the questions raised in the introduction [ 6 , 20 , 27 ].
• Results should be written in past tense without any interpretation [ 6 , 27 ].

Interdependence between methods and results of the manuscript.

• It is always better to take refuge in tables and figures to drive the exhaustive data through. Repetition of the data already carried in tables, figures, etc., should be avoided [ 4 , 6 , 20 ].
• Proper positioning and citations of the tables and figures within the main text are also critical for the flow of information and quality of the manuscript [ 6 , 11 ].
• Results section should carry clear descriptive and inferential statistics in tables and/or figures, for ease of reference to readers.
• Provision of the demographic data of the study participants takes priority in the results section; therefore, it should be made as its first paragraph. The subsequent paragraphs should introduce the inferential analysis of the data based on the rationale and objectives of the study. The last paragraphs mention what new results the study is going to offer [ 6 , 11 , 20 ].
• authors should not attempt to report all analysis of the data. Discussing, interpreting, or contextualizing the results should be avoided [ 20 ].

10. Discussion

• (i) The main purpose of writing a discussion is to fill the gap that was identified in the introduction of the manuscript and provide true interpretations of the results [ 6 , 11 , 20 ].

Pyramid scheme followed while writing the discussion section of manuscript, moving from the key results of the study to the specific conclusions.

• (iii) Discussion section toggles between two things—content and context. The authors need to exhaustively describe their interpretation of the analyzed data (content) and then compare it with the available relevant literature (context) [ 1 , 29 ]. Finally, it should justify everything in conclusion as to what all this means for the field of study.
• (iv) The comparison can either be concordant or discordant, but it needs to highlight the uniqueness and importance of the study in the field. Care should be taken not to cover up any deviant results, which do not gel with the current literature [ 30 ].
• (v) In discussion it is safe to use words such as “may,” “might,” “show,” “demonstrate,” “suggest,” and “report” while impressing upon your study's data and analyzed results.
• (vi) Putting results in context helps in identifying the strengths and weakness of the study and enables readers to get answers to two important questions—one “what are the implications of the study?” Second “how the study advance the field further?” [ 1 , 30 ].
• The first paragraph of the discussion is reserved for highlighting the key results of the study as briefly as possible [ 4 , 6 ]. However, care should be taken not to have any redundancy with the results section. The authors should utilize this part to emphasize the originality and significance of their results in the field [ 1 , 4 , 11 , 20 ].
• The second paragraph should deal with the importance of your study in relationship with other studies available in the literature [ 4 ].
• Subsequent paragraphs should focus on the context, by describing the findings in comparison with other similar studies in the field and how the gap in the knowledge has been filled [ 1 , 4 ].
• In the penultimate paragraph, authors need to highlight the strengths and limitations of the study [ 4 , 6 , 30 ].
• Final paragraph of the discussion is usually reserved for drawing the generalized conclusions for the readers to get a single take-home message.
• (viii) A well-balanced discussion is the one that effectively addresses the contribution made by this study towards the advancement of knowledge in general and the field of research in particular [ 7 ]. It essentially should carry enough information that the audience knows how to apply the new interpretation presented within that field.

11. Conclusion

• It usually makes the last part of the manuscript, if not already covered within the discussion part [ 6 , 20 ].
• Being the last part of the main text, it has a long-lasting impact on the reader and hence should be very clear in presenting the chief findings of the paper as per the rationale and objectives of the study [ 4 , 20 ].

Crux of the conclusion section.

12. References or Bibliography

• Every article needs a suitable and relevant citation of the available literature to carry the contextual message of their results to the readers [ 31 ].
• Inclusion of proper references in the required format, as asked by the target journal, is necessary.

A Google Scholar screenshot of different styles of formatting of references.

• Depending upon the journal and publishing house, usually, 30–50 citations are allowed in an original study, and they need to be relevant and recent.

13. Organization of the Manuscript Package

Ideally, all manuscripts, no matter where they have to be submitted, should follow an approved organization, which is universally used by all publication houses. “Ready to submit” manuscript package should include the following elements:

• (i) Cover letter, addressed to the chief editor of the target journal.
• (ii) Authorship file, containing the list of authors, their affiliations, emails, and ORCIDs.
• (iii) Title page, containing three things—title, abstract, and keywords.
• Main text structured upon IMRAD scheme.
• References as per required format.
• Legends to all tables and figures.
• Miscellaneous things such as author contributions, acknowledgments, conflicts of interest, funding body, and ethical approvals.
• (v) Tables as a separate file in excel format.
• (vi) Figures or illustrations, each as a separate file in JPEG or TIFF format [ 32 ].
• (vii) Reviewers file, containing names of the suggested peer reviewers working or publishing in the same field.
• (viii) Supplementary files, which can be raw data files, ethical clearance from Institutional Review Board (IRBs), appendixes, etc.

14. Overview of an Editorial Process

Each scientific journal has a specific publication policies and procedures, which govern the numerous steps of the publication process. In general, all publication houses process the submission of manuscripts via multiple steps tightly controlled by the editors and reviewers [ 33 ]. Figure 12 provides general overview of the six-step editorial process of the scientific journal.

An overview of the journal's editorial process.

15. Summary

The basic criteria for writing any scientific communication are to know how to communicate the information effectively. In this review, we have provided the critical information of do's and don'ts for the naive authors to follow in making their manuscript enough impeccable and error-free that on submission manuscript is not desk rejected at all. but this goes with mentioning that like any other skill, and the writing is also honed by practicing and is always reflective of the knowledge the writer possesses. Additionally, an effective manuscript is always based on the study design and the statistical analysis done. The authors should always bear in mind that editors apart from looking into the novelty of the study also look at how much pain authors have taken in writing, following guidelines, and formatting the manuscript. Therefore, the organization of the manuscript as per provided guidelines such as IMRAD, CONSORT, and PRISMA should be followed in letter and spirit. Care should be taken to avoid the mistakes, already enlisted, which can be the cause of desk rejection. As a general rule, before submission of the manuscript to the journal, sanitation check involving at least two reviews by colleagues should be carried out to ensure all general formatting guidelines are followed.

Acknowledgments

The authors would like to thank all academicians and researchers who have actively participated in the “Writing Manuscript Workshops” at the College of Medicine, KSAU-HS, Jeddah, which prompted them to write this review.

Data Availability

Conflicts of interest.

The authors declare no conflicts of interest.

Authors' Contributions

Both authors have critically reviewed and approved the final draft and are responsible for the content and similarity index of the manuscript. SSA conceptualized the study, designed the study, surveyed the existing literature, and wrote the manuscript. SN edited, revised, and proofread the final manuscript.

• Dean of the Graduate School
• PhD Program Characteristics
• Graduate Events
• Graduate Degrees awarded at USC
• Fellowships
• Guidelines and Forms
• Student Resources
• Required Documents
• Submission Deadlines
• Guidelines to Submission

Manuscript Formatting Guidelines

• Fellowships for PhD Students
• Scholarships for Masters Students
• Academic Support, Professional Development and Diversity Inclusion Programs

Thesis and Dissertation Formatting Guidelines

Each graduate program that requires a dissertation or thesis has adopted a style used by scholarly publications in the field. The student and advisor are responsible for ensuring that this style is used consistently throughout the manuscript. The Graduate School provides general formatting guidance to ensure consistency across the university.

Download the USC Graduate School Thesis and Dissertation Formatting Guidelines here.

University Policy on Multiple Authors and Creators

When collaborative research products and creative works are disseminated, it is essential that the list of authors and creators accurately assigns credit among the collaborators for their intellectual and creative contributions (based on the standards/customs applicable to the field and/or the publication), and that appropriate means are also used to acknowledge others who have contributed to or supported the research or creative process.

Plagiarism and Academic Integrity

Appropriate formatting also requires the correct acknowledgement of source material. According to the USC SCampus Student Guidebook, examples of plagiarism include:

• The submission of material authored by another person but represented as the student’s own work, whether that material is paraphrased or copied in verbatim or near-verbatim form.
• The submission of material subjected to editorial revision by another person that results in substantive changes in content or major alteration of writing style.
• Improper acknowledgment of sources in essays or papers.

For more information, please refer to the USC SCampus Student Guidebook,  Section 11.11.

Signature Page

Graduate Capstone Style Guide: Occupational Therapy

• Introduction
• Formatting Your Manuscript
• Formatting for Accessibility This link opens in a new window
• Copyright and Use of Images
• Intellectual Property
• Using Human Research Subjects
• Depositing Your Manuscript
• Go to Dominican Scholar
• Upcoming Webinars This link opens in a new window

Word Processing Applications

Microsoft word.

All students and faculty have access to Microsoft Word (along with the complete Office suite) through Office 365 in the Okta dashboard. Download and install Office onto your computer, you will need to use the desktop version.

Google Docs

If you opt to use Google Docs to write the bulk of your manuscript, you will at some point need to download it as a MS Word document and finish the formatting in Word. It’s recommended that you wait until you are finished with writing your manuscript.

Introduction to Formatting

Master’s theses, capstone projects, and culminating projects.

Because a manuscript or project is usually an objective, unbiased investigation based upon the author's scholarly work, it should be written in a formal scholarly manner appropriate to academic publications.  It is important to be consistent in matters of style, punctuation, headings, the use of capitalization, and the placement of figures and tables and their corresponding captions. The presentation of data should be clear and clutter-free, utilizing a legible font and size.

IMPORTANT! The Guidelines take precedence over other style guides or department handbooks and example theses provided to you by your instructor. If there seems to be a serious conflict, check with the Library and have your manuscript advisors do the same.

Manuscript front matter, margin, pagination, and document structure requirements are specified throughout this guide, and must be observed as stated, no matter what other guidelines dictate. Remaining format issues are governed by standard publication manuals and/or standards of publication in your discipline.

Required Order of Manuscript Pages

Formatting of your manuscript.

• General Formatting
• Copyright Statement
• Acknowledgements
• Table of Contents
• List of Tables
• List of Figures
• Body of your Paper
• Bibliography

Page Size and Margins

• The entire document is letter sized (8.5" x 11")
• Portrait orientation
• 1-inch margin on all sides (top, bottom, right, and left)
• Choose a font that is clear and business-like; avoid unusual or difficult to read fonts.  We recommend using standard fonts like Times New Roman, Calibri, or Arial.
• Use 12 point font size. 

Line Spacing

• Use double-spacing throughout your manuscript.
• Blockquotes and bibliographies may be single-spaced

Page Numbers

• Page numbers appear at the  top right corner  of each page
• Step by Step: Basic Set up of your paper in Google Docs
• Step by Step: Basic set up of your paper in MS Word Learn how to set up the basics for your manuscript including, paper size, margins, font style, font size, line spacing, and paragraph indentations.
• Step by Step: Page Number Basics in MS Word In this tutorial you'll learn how to:(1) insert page numbers and (2) start your page numbering on page 2.
• Step by Step: Advanced Page Numbers in MS Word

Running Heads

• Do not use running heads in the final version of your manuscript
• Left aligned
• Indent the first line of each paragraph 0.5”
• When dividing paragraphs across pages, at least two lines of text should appear at the bottom of the page and at least two lines of text on the next page.

Block quotes

• For quotations longer than 40 words in length (block quotes)
• inset 0.5” from the left and right margin
• The In-text citation follows the last punctuation mark of the paragraph
• Step by Step: Formatting blockquotes in Google Docs

Major Headings

• Sections starting with a Major heading (Heading 1) should begin on a new page. Do not place a major heading in the middle of the page.

Subheadings

• Subheadings within a chapter do not begin on a new page unless the preceding page is filled. 
• Subheadings at the bottom of a page require at least two lines of text following the heading, otherwise the heading should be pushed to the next page.
• Step by Step: Heading Styles in Google Docs
• Step by Step: Heading Styles in MS Word

Tables and Figures

• Tables and figures should follow their first reference in the text within a page or two at the most. If more clarity is provided by placing tables and figures in an appendix, this style is also acceptable. In this case, they should appear after the References.
• All tables and figures in your paper must include a caption located either above or below the table or figure. Be consistent in placement.
• Table and figure captions should appear in consecutive numerical order (e.g. Figure 1, Figure 2, Figure 3...) and in the order in which the tables and figures appear in the text
• Tables and figures must be referenced in your text (e.g. see Figure 1)
• Tables and figures must fit within the margins of your paper (see below for Large Tables and Figures)
• All tables and figures, even if there is only one, must be listed in a List of Tables and/or a List of Figures located on separate pages following the Table of Contents . The List of Tables and the List of Figures should include a Table/Figure number along with descriptive text (usually a portion of the caption) and the page number on which it occurs.
• Diagrams, drawings, graphs, charts, maps, photographs, or any other type of illustrations should be referred to in the manuscript as a Figure .
• Figures may not appear on the title page or other introductory pages.
• Figures should use word wrapping that is inline with the text.
• Figures should include Alt Text
• Tables are used for presenting sets of data. Tables should not be used to format text or images.
• The first row of a table should be a header row that describes the information presented in each column
• Do not use screenshots of tables from other sources in your work. If you have an image of a table from another source, recreate the table natively in your document using your word processor

Large Tables and Figures

• Large tables or figures can be placed on the page in landscape orientation
• The top and bottom margins should be the same as on a regular page
• Step by Step: Flipping a page into landscape orientation in Google Docs

Special Formatting

• Title is bold-faced
• Text is centered on the page

Additional Information

The title page has 3 sections:

• appears at the top of the page and has 3 lines (1 st  line) Title (2 nd  line) by (3 rd  line) author name(s)
• centered vertically and horizontally on the page 
• Use the following statement: A culminating [thesis or capstone project] submitted to the faculty of Dominican University of California in partial fulfillment of the requirements for the degree of [degree name] in [major]
• has 3 lines (NOTE: do not include the numbers):
• Dominican University of California
• San Rafael, CA
• Your graduation year (e.g. 2022)
• Step by Step: Formatting Your Title Page in Google Docs
• Step by Step: Formatting your Title Page in MS Word

You automatically own the copyright to your work and no one may legally copy any part of it without your permission.   You also may choose to use a Creative Commons copyright to give readers more flexibility with what they can do with your manuscript or sections of your manuscript.  If you have questions about copyright options please contact The Scholarly Communications Librarian

• The copyright statement appears centered and at the top of the page
• Use the following statement, replacing the brackets with the appropriate information Copyright © [author's name] [year of publication]. All rights reserved
• The abstract states the purpose, design, and results of the research or a description of your project;
• written concisely, usually no more than 350 words
• not to exceed 1 page.

An acknowledgments page includes a short paragraph acknowledging those people who helped and supported you through the manuscript process. People have included instructors, advisors, parents, siblings, significant others, pets, etc.

Your manuscript must include a Table of Contents listing all major headings that appear including the Abstract, Acknowledgements, List of Tables, and List of Figures.

Page numbers listed in the table of contents correspond with the material presented in your manuscript. If you are asked to make revisions within your manuscript, make sure to check that the page numbers listed in the Table of Contents, List of Tables, and List of Figures are still correct.  Any headings, subheadings, or captions listed in the front matter must match exactly with those that appear within the manuscript.

• Step by Step: Table of Contents in Google Docs
• If you have any tables in your manuscript you must include a List of Tables on it's own page after the Table of Contents
• The List of Tables includes each table (even if there is only one) listed sequentially as they appear in your paper
• Each item in the List includes the table number and a short description (usually the whole or a portion of the table caption) and the page number on which the table appears.
• Step by Step: Creating a List of Tables or List of Figures in Google Docs
• Step by Step: Creating Captions for Tables and Figures in MS Word
• Step by Step: Creating a List of Tables or List of Figures in MS Word
• The List of Figures includes each figure (even if there is only one) listed sequentially as they appear in your paper.
• Each item in the List of Figures includes the figure number and a short description (usually the whole or a portion of the table caption) and the page number on which it appears.

The body of your thesis is the main portion of your manuscript. Follow the general formatting as described under the General Formatting tab

IMPORTANT!  The Guidelines take precedence over other style guides or department handbooks and example theses provided to you by your instructor. If there seems to be a serious conflict, check with the Library and have your manuscript advisors do the same.

• The References, Works Cited, or Bibliography heading is a major heading and the formatting should be the same as other major headings in the manuscript
• Use most appropriate citation style for your discipline (APA, Chicago, or MLA). Include hanging indents if that is indicated for your style
• If you are using a citation tool, such as RefWorks, it is the author's responsibility to make sure that citations are correct including fixing typos and capitalization when needed.

Online Tools

An online citation manager to organize your research and create bibliographies to help you avoid plagiarism. RefWorks can format in 900+ styles including APA, MLA, Chicago, AMA. Learn more about using RefWorks and what it can do for you .

To use RefWorks you will need to first create an account

• Follow the link to the RefWorks landing page
•   Look for and select the link at the bottom of the login box titled Create Account
• Use your Dominican email
• Create a password and follow any other instructions

Once you've created an account you can log in and start using RefWorks

• An appendix should be introduced with a cover page bearing only the title of the appendix centered and 1" from the top of the page. 
• The content of the appendix begins on the next page with the standard margins.
• Table and figures in appendices should be captioned and continue the numbering sequence used in the text
• If you applied for an IRB number include your IRB acceptance letter as your last appendix
• << Previous: Introduction
• Next: Formatting for Accessibility >>
• Last Updated: Oct 16, 2023 1:13 PM
• URL: https://libguides.dominican.edu/occupational-therapy-capstone-style-guide

• Colleges & Degrees
• Academic Calendar
• International Education
• Graduate Studies
• Accreditation
• Tuition and Fees
• Parking & Maps
• Careers with CSULB
• Alumni Home
• Alumni Volunteering
• Alumni Giving

Campus Life

• Centers & Organizations
• Commencement
• Student Life
• Office of the President
• Office of the Provost
• Administration & Finance
• Student Affairs
• University Relations & Development
• Information Technology
• Beach Shops
• Campus Directory
• Enrollment Services
• Financial Aid
• Schedule of Classes
• Student Records
• 49er Foundation
• Research Foundation

1250 BELLFLOWER BOULEVARD LONG BEACH, CALIFORNIA 90840 562.985.4111

Mini Manuscript

The Mini Manuscript is a document formatting using University Guidelines rules. You can go through page-by-page to see examples of formatting for all the pages you will need in your manuscript. Look in the appendices for examples of formatting for pages that would not logically fit in one document, like the title page for a project report or a dissertation

• Mini Manuscript (PDF)